ScType: Fully-automated cell type identification of scRNA-seq profiles


ScType is a computational platform, which enables data-driven, fully-automated and ultra-fast cell-type identification based solely on given scRNA-seq data, combined with our comprehensive cell marker database as background information.

Citation: Ianevski, A., Giri, A.K. & Aittokallio, T. Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data. Nat Commun 13, 1246 (2022).

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